Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.22□□□□□ -0.93
Cdx4Q07424 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.22□□□□□ -0.93
Cdx4Q07424 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm23119-201ENSMUST00000158610 140 ntBASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.22□□□□□ -0.93
Cdx4Q07424 AA914427-201ENSMUST00000193194 1166 ntBASIC9.22□□□□□ -0.93
Cdx4Q07424 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.22□□□□□ -0.93
Cdx4Q07424 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.22□□□□□ -0.93
Cdx4Q07424 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Cdx4Q07424 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.21□□□□□ -0.93
Cdx4Q07424 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Cdx4Q07424 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.21□□□□□ -0.93
Cdx4Q07424 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Cdx4Q07424 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.21□□□□□ -0.93
Cdx4Q07424 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Cdx4Q07424 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx4Q07424 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Cdx4Q07424 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.94
Cdx4Q07424 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Cdx4Q07424 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.21□□□□□ -0.94
Cdx4Q07424 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.21□□□□□ -0.94
Cdx4Q07424 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.21□□□□□ -0.94
Cdx4Q07424 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Gm9022-201ENSMUST00000182482 992 ntBASIC9.21□□□□□ -0.94
Cdx4Q07424 Gm2260-201ENSMUST00000184965 657 ntBASIC9.21□□□□□ -0.94
Cdx4Q07424 Gm28882-201ENSMUST00000185504 314 ntBASIC9.21□□□□□ -0.94
Cdx4Q07424 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.21□□□□□ -0.94
Cdx4Q07424 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Gm44882-201ENSMUST00000205702 802 ntBASIC9.21□□□□□ -0.94
Cdx4Q07424 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.21□□□□□ -0.94
Cdx4Q07424 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.21□□□□□ -0.94
Cdx4Q07424 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.21□□□□□ -0.94
Cdx4Q07424 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.21□□□□□ -0.94
Cdx4Q07424 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.21□□□□□ -0.94
Cdx4Q07424 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cdx4Q07424 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cdx4Q07424 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx4Q07424 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms