Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.48□□□□□ -0.41
Cntn3Q07409 Gm23085-201ENSMUST00000157849 293 ntBASIC12.48□□□□□ -0.41
Cntn3Q07409 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.48□□□□□ -0.41
Cntn3Q07409 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.48□□□□□ -0.41
Cntn3Q07409 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.48□□□□□ -0.41
Cntn3Q07409 Gm18893-201ENSMUST00000198416 943 ntBASIC12.48□□□□□ -0.41
Cntn3Q07409 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.48□□□□□ -0.41
Cntn3Q07409 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.48□□□□□ -0.41
Cntn3Q07409 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn3Q07409 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.47□□□□□ -0.41
Cntn3Q07409 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm23251-201ENSMUST00000103773 110 ntBASIC12.47□□□□□ -0.41
Cntn3Q07409 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm13045-201ENSMUST00000119019 712 ntBASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.47□□□□□ -0.41
Cntn3Q07409 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm8100-201ENSMUST00000182906 988 ntBASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm27530-201ENSMUST00000184096 98 ntBASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm19353-201ENSMUST00000184561 445 ntBASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm2965-201ENSMUST00000198365 343 ntBASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.47□□□□□ -0.41
Cntn3Q07409 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn3Q07409 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Cntn3Q07409 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.47□□□□□ -0.41
Cntn3Q07409 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn3Q07409 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Cntn3Q07409 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.46□□□□□ -0.41
Cntn3Q07409 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Cntn3Q07409 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Cntn3Q07409 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cntn3Q07409 Gm24891-201ENSMUST00000104391 136 ntBASIC12.46□□□□□ -0.41
Cntn3Q07409 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 Gm14263-201ENSMUST00000117955 746 ntBASIC12.46□□□□□ -0.41
Cntn3Q07409 Gm13611-201ENSMUST00000118269 318 ntBASIC12.46□□□□□ -0.41
Cntn3Q07409 Gm8566-201ENSMUST00000120174 465 ntBASIC12.46□□□□□ -0.41
Cntn3Q07409 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.46□□□□□ -0.41
Cntn3Q07409 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn3Q07409 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms