Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a1Q04857 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Col6a1Q04857 Gm11354-201ENSMUST00000121974 422 ntBASIC13.16□□□□□ -0.3
Col6a1Q04857 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Gm8531-201ENSMUST00000188319 893 ntBASIC13.16□□□□□ -0.3
Col6a1Q04857 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a1Q04857 Gm45575-201ENSMUST00000210283 548 ntBASIC13.16□□□□□ -0.3
Col6a1Q04857 Gm45594-201ENSMUST00000211717 241 ntBASIC13.16□□□□□ -0.3
Col6a1Q04857 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a1Q04857 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col6a1Q04857 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a1Q04857 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col6a1Q04857 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a1Q04857 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Gm7722-201ENSMUST00000120646 741 ntBASIC13.15□□□□□ -0.3
Col6a1Q04857 Gm13022-201ENSMUST00000121181 285 ntBASIC13.15□□□□□ -0.3
Col6a1Q04857 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.15□□□□□ -0.3
Col6a1Q04857 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Mt1-202ENSMUST00000211807 1085 ntBASIC13.15□□□□□ -0.3
Col6a1Q04857 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.15□□□□□ -0.3
Col6a1Q04857 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Col6a1Q04857 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.15□□□□□ -0.3
Col6a1Q04857 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a1Q04857 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col6a1Q04857 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col6a1Q04857 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col6a1Q04857 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 Gm24231-201ENSMUST00000104315 133 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 Gm22711-201ENSMUST00000116890 133 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 Gm8731-201ENSMUST00000118088 412 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.14□□□□□ -0.31
Col6a1Q04857 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.14□□□□□ -0.31
Col6a1Q04857 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 Gm3551-201ENSMUST00000190750 664 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.14□□□□□ -0.31
Col6a1Q04857 Gm18463-201ENSMUST00000207258 474 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.14□□□□□ -0.31
Col6a1Q04857 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col6a1Q04857 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a1Q04857 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms