Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.96□□□□□ -0.49
Pfdn6Q03958 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.96□□□□□ -0.49
Pfdn6Q03958 Gm14381-201ENSMUST00000122105 414 ntBASIC11.96□□□□□ -0.49
Pfdn6Q03958 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.96□□□□□ -0.49
Pfdn6Q03958 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.96□□□□□ -0.49
Pfdn6Q03958 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.96□□□□□ -0.49
Pfdn6Q03958 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfdn6Q03958 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.96□□□□□ -0.49
Pfdn6Q03958 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.96□□□□□ -0.5
Pfdn6Q03958 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pfdn6Q03958 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pfdn6Q03958 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pfdn6Q03958 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pfdn6Q03958 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pfdn6Q03958 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pfdn6Q03958 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.95□□□□□ -0.5
Pfdn6Q03958 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.95□□□□□ -0.5
Pfdn6Q03958 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.95□□□□□ -0.5
Pfdn6Q03958 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm27516-201ENSMUST00000184237 98 ntBASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm44651-201ENSMUST00000207343 372 ntBASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.95□□□□□ -0.5
Pfdn6Q03958 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.95□□□□□ -0.5
Pfdn6Q03958 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfdn6Q03958 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pfdn6Q03958 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfdn6Q03958 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms