Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Gm15236-201ENSMUST00000117309 379 ntBASIC12.24□□□□□ -0.45
Trim43bP86448 Gm11930-201ENSMUST00000117788 190 ntBASIC12.24□□□□□ -0.45
Trim43bP86448 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Trim43bP86448 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim43bP86448 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.24□□□□□ -0.45
Trim43bP86448 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim43bP86448 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim43bP86448 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43bP86448 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim43bP86448 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.23□□□□□ -0.45
Trim43bP86448 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.23□□□□□ -0.45
Trim43bP86448 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Gm23119-201ENSMUST00000158610 140 ntBASIC12.23□□□□□ -0.45
Trim43bP86448 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.23□□□□□ -0.45
Trim43bP86448 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim43bP86448 Gm5950-201ENSMUST00000213337 772 ntBASIC12.23□□□□□ -0.45
Trim43bP86448 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim43bP86448 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.23□□□□□ -0.45
Trim43bP86448 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.23□□□□□ -0.45
Trim43bP86448 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim43bP86448 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms