Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Atf1P81269 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Atf1P81269 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Atf1P81269 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.28□□□□□ -0.76
Atf1P81269 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Atf1P81269 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Atf1P81269 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.28□□□□□ -0.76
Atf1P81269 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Atf1P81269 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
Atf1P81269 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Atf1P81269 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.27□□□□□ -0.76
Atf1P81269 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Atf1P81269 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Atf1P81269 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.27□□□□□ -0.76
Atf1P81269 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Atf1P81269 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Atf1P81269 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Atf1P81269 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
Atf1P81269 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Atf1P81269 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Atf1P81269 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.27□□□□□ -0.77
Atf1P81269 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.27□□□□□ -0.77
Atf1P81269 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Atf1P81269 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Gm6963-201ENSMUST00000147879 379 ntBASIC10.27□□□□□ -0.77
Atf1P81269 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.27□□□□□ -0.77
Atf1P81269 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Gm6114-201ENSMUST00000182472 968 ntBASIC10.27□□□□□ -0.77
Atf1P81269 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.27□□□□□ -0.77
Atf1P81269 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.27□□□□□ -0.77
Atf1P81269 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.27□□□□□ -0.77
Atf1P81269 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.27□□□□□ -0.77
Atf1P81269 Gm19187-201ENSMUST00000206781 892 ntBASIC10.27□□□□□ -0.77
Atf1P81269 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.27□□□□□ -0.77
Atf1P81269 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.27□□□□□ -0.77
Atf1P81269 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.27□□□□□ -0.77
Atf1P81269 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Atf1P81269 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Atf1P81269 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.27□□□□□ -0.77
Atf1P81269 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Atf1P81269 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Atf1P81269 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.26□□□□□ -0.77
Atf1P81269 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.26□□□□□ -0.77
Atf1P81269 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Atf1P81269 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Atf1P81269 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.26□□□□□ -0.77
Atf1P81269 Gm14127-201ENSMUST00000117906 678 ntBASIC10.26□□□□□ -0.77
Atf1P81269 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.26□□□□□ -0.77
Atf1P81269 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.26□□□□□ -0.77
Atf1P81269 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Atf1P81269 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.26□□□□□ -0.77
Atf1P81269 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.26□□□□□ -0.77
Atf1P81269 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.26□□□□□ -0.77
Atf1P81269 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms