Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smad1P70340 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smad1P70340 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smad1P70340 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.28□□□□□ -0.44
Smad1P70340 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.28□□□□□ -0.44
Smad1P70340 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smad1P70340 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smad1P70340 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smad1P70340 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smad1P70340 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.28□□□□□ -0.44
Smad1P70340 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.28□□□□□ -0.44
Smad1P70340 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smad1P70340 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smad1P70340 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smad1P70340 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smad1P70340 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Smad1P70340 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smad1P70340 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smad1P70340 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smad1P70340 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smad1P70340 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smad1P70340 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Smad1P70340 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.27□□□□□ -0.44
Smad1P70340 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Smad1P70340 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smad1P70340 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smad1P70340 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smad1P70340 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Smad1P70340 Gm3096-201ENSMUST00000185770 364 ntBASIC12.27□□□□□ -0.45
Smad1P70340 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.27□□□□□ -0.45
Smad1P70340 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.27□□□□□ -0.45
Smad1P70340 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.27□□□□□ -0.45
Smad1P70340 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Smad1P70340 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Smad1P70340 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Smad1P70340 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.27□□□□□ -0.45
Smad1P70340 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.27□□□□□ -0.45
Smad1P70340 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Smad1P70340 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.27□□□□□ -0.45
Smad1P70340 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Smad1P70340 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Smad1P70340 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smad1P70340 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smad1P70340 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smad1P70340 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smad1P70340 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.26□□□□□ -0.45
Smad1P70340 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Smad1P70340 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.26□□□□□ -0.45
Smad1P70340 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.26□□□□□ -0.45
Smad1P70340 Gm44958-201ENSMUST00000203734 736 ntBASIC12.26□□□□□ -0.45
Smad1P70340 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.26□□□□□ -0.45
Smad1P70340 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.26□□□□□ -0.45
Smad1P70340 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Gm8385-201ENSMUST00000058999 643 ntBASIC12.26□□□□□ -0.45
Smad1P70340 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.26□□□□□ -0.45
Smad1P70340 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Smad1P70340 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Smad1P70340 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.26□□□□□ -0.45
Smad1P70340 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smad1P70340 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Smad1P70340 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms