Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Osbpl3-201ENSMUST00000071728 3307 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Sox2ot-211ENSMUST00000197977 2970 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm43773-201ENSMUST00000198548 2162 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 4931431C16Rik-201ENSMUST00000124643 2735 ntTSL 2 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm7336-201ENSMUST00000107041 1232 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Gm12537-201ENSMUST00000119266 1002 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Gm12070-201ENSMUST00000119551 1002 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Gm12671-201ENSMUST00000119978 1002 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Gm13292-201ENSMUST00000120014 1000 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Gm13394-201ENSMUST00000121658 1000 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Gm14760-201ENSMUST00000121831 999 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC6.77□□□□□ -1.33
Rps28P62858 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm10359-201ENSMUST00000180167 1002 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Gm12033-201ENSMUST00000180654 1002 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Gm5559-201ENSMUST00000180755 1002 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Alkbh1-212ENSMUST00000185301 408 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC6.77□□□□□ -1.33
Rps28P62858 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm45098-201ENSMUST00000207179 657 ntBASIC6.77□□□□□ -1.33
Rps28P62858 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC6.77□□□□□ -1.33
Rps28P62858 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm10371-202ENSMUST00000228010 1081 ntBASIC6.77□□□□□ -1.33
Rps28P62858 AC122769.4-201ENSMUST00000228166 901 ntBASIC6.77□□□□□ -1.33
Rps28P62858 AC131997.1-201ENSMUST00000228611 1229 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Rps28P62858 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Rps28P62858 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Rps28P62858 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Rps28P62858 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rps28P62858 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Rps28P62858 Gm45139-201ENSMUST00000206543 2057 ntBASIC6.77□□□□□ -1.33
Rps28P62858 Ednrb-202ENSMUST00000172237 3989 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
Rps28P62858 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Amph-204ENSMUST00000200466 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Col6a1-201ENSMUST00000001147 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Rps28P62858 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Styk1-201ENSMUST00000049150 3380 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC6.76□□□□□ -1.33
Rps28P62858 Gm10608-201ENSMUST00000093527 2509 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Rps28P62858 Gm37373-201ENSMUST00000194005 2812 ntBASIC6.76□□□□□ -1.33
Rps28P62858 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rps28P62858 Kif28-203ENSMUST00000221136 3538 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms