Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.23□□□□□ -0.61
Nup43P59235 Gm807-202ENSMUST00000224929 408 ntBASIC11.23□□□□□ -0.61
Nup43P59235 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.23□□□□□ -0.61
Nup43P59235 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Nup43P59235 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Nup43P59235 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.23□□□□□ -0.61
Nup43P59235 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Nup43P59235 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nup43P59235 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nup43P59235 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.22□□□□□ -0.61
Nup43P59235 Gm11509-201ENSMUST00000117358 325 ntBASIC11.22□□□□□ -0.61
Nup43P59235 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Gm14441-201ENSMUST00000121960 540 ntBASIC11.22□□□□□ -0.61
Nup43P59235 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Nup43P59235 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC11.22□□□□□ -0.61
Nup43P59235 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.22□□□□□ -0.61
Nup43P59235 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Gm2594-201ENSMUST00000214774 742 ntBASIC11.22□□□□□ -0.61
Nup43P59235 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.22□□□□□ -0.61
Nup43P59235 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.22□□□□□ -0.61
Nup43P59235 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.22□□□□□ -0.61
Nup43P59235 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Nup43P59235 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nup43P59235 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.22□□□□□ -0.61
Nup43P59235 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.21□□□□□ -0.61
Nup43P59235 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nup43P59235 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nup43P59235 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.21□□□□□ -0.61
Nup43P59235 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nup43P59235 Gm23596-201ENSMUST00000104304 132 ntBASIC11.21□□□□□ -0.61
Nup43P59235 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nup43P59235 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.21□□□□□ -0.61
Nup43P59235 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.21□□□□□ -0.61
Nup43P59235 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nup43P59235 Gm6114-201ENSMUST00000182472 968 ntBASIC11.21□□□□□ -0.61
Nup43P59235 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nup43P59235 Gm28450-201ENSMUST00000187349 638 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms