Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Gm15198-201ENSMUST00000117283 177 ntBASIC12.14□□□□□ -0.47
Tubgcp3P58854 Gm14723-201ENSMUST00000118686 215 ntBASIC12.14□□□□□ -0.47
Tubgcp3P58854 Gm38241-201ENSMUST00000192641 898 ntBASIC12.14□□□□□ -0.47
Tubgcp3P58854 Gm3961-201ENSMUST00000204425 994 ntBASIC12.14□□□□□ -0.47
Tubgcp3P58854 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Gm14381-201ENSMUST00000122105 414 ntBASIC12.13□□□□□ -0.47
Tubgcp3P58854 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.13□□□□□ -0.47
Tubgcp3P58854 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.13□□□□□ -0.47
Tubgcp3P58854 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.13□□□□□ -0.47
Tubgcp3P58854 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.13□□□□□ -0.47
Tubgcp3P58854 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubgcp3P58854 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Rprl1-202ENSMUST00000198476 238 ntBASIC12.12□□□□□ -0.47
Tubgcp3P58854 Gm43179-201ENSMUST00000198797 275 ntBASIC12.12□□□□□ -0.47
Tubgcp3P58854 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.12□□□□□ -0.47
Tubgcp3P58854 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubgcp3P58854 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms