Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
NcanP55066 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NcanP55066 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NcanP55066 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
NcanP55066 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.48□□□□□ -0.41
NcanP55066 Gm13981-201ENSMUST00000122360 447 ntBASIC12.48□□□□□ -0.41
NcanP55066 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.48□□□□□ -0.41
NcanP55066 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Gm6612-201ENSMUST00000170777 395 ntBASIC12.48□□□□□ -0.41
NcanP55066 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.48□□□□□ -0.41
NcanP55066 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.48□□□□□ -0.41
NcanP55066 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.48□□□□□ -0.41
NcanP55066 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.48□□□□□ -0.41
NcanP55066 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
NcanP55066 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.48□□□□□ -0.41
NcanP55066 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NcanP55066 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.48□□□□□ -0.41
NcanP55066 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
NcanP55066 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.48□□□□□ -0.41
NcanP55066 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
NcanP55066 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.47□□□□□ -0.41
NcanP55066 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NcanP55066 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.47□□□□□ -0.41
NcanP55066 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.47□□□□□ -0.41
NcanP55066 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.47□□□□□ -0.41
NcanP55066 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
NcanP55066 Gm23595-201ENSMUST00000104306 130 ntBASIC12.47□□□□□ -0.41
NcanP55066 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Gm12247-201ENSMUST00000117585 670 ntBASIC12.47□□□□□ -0.41
NcanP55066 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NcanP55066 Gm15196-201ENSMUST00000121406 482 ntBASIC12.47□□□□□ -0.41
NcanP55066 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC12.47□□□□□ -0.41
NcanP55066 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NcanP55066 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NcanP55066 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.47□□□□□ -0.41
NcanP55066 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NcanP55066 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
NcanP55066 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
NcanP55066 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NcanP55066 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.46□□□□□ -0.41
NcanP55066 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.46□□□□□ -0.41
NcanP55066 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms