Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Sox3P53784 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sox3P53784 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Sox3P53784 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sox3P53784 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.43□□□□□ -0.58
Sox3P53784 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.43□□□□□ -0.58
Sox3P53784 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.43□□□□□ -0.58
Sox3P53784 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Gm1821-202ENSMUST00000227415 750 ntBASIC11.43□□□□□ -0.58
Sox3P53784 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.43□□□□□ -0.58
Sox3P53784 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Sox3P53784 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Sox3P53784 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sox3P53784 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Sox3P53784 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sox3P53784 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox3P53784 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.42□□□□□ -0.58
Sox3P53784 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Sox3P53784 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Sox3P53784 Gm14644-201ENSMUST00000116671 647 ntBASIC11.42□□□□□ -0.58
Sox3P53784 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.42□□□□□ -0.58
Sox3P53784 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox3P53784 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox3P53784 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox3P53784 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox3P53784 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox3P53784 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Gm23363-201ENSMUST00000175024 79 ntBASIC11.42□□□□□ -0.58
Sox3P53784 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.42□□□□□ -0.58
Sox3P53784 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox3P53784 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox3P53784 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Gm45398-201ENSMUST00000210561 165 ntBASIC11.42□□□□□ -0.58
Sox3P53784 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.42□□□□□ -0.58
Sox3P53784 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.42□□□□□ -0.58
Sox3P53784 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Gm26035-201ENSMUST00000083065 308 ntBASIC11.42□□□□□ -0.58
Sox3P53784 Gm21811-201ENSMUST00000096485 930 ntBASIC11.42□□□□□ -0.58
Sox3P53784 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sox3P53784 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox3P53784 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox3P53784 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox3P53784 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sox3P53784 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox3P53784 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms