Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RoraP51448 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RoraP51448 Gm12616-201ENSMUST00000118594 382 ntBASIC11.29□□□□□ -0.6
RoraP51448 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.29□□□□□ -0.6
RoraP51448 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.29□□□□□ -0.6
RoraP51448 Gm9550-201ENSMUST00000161130 862 ntBASIC11.29□□□□□ -0.6
RoraP51448 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RoraP51448 Gm12624-201ENSMUST00000177615 382 ntBASIC11.29□□□□□ -0.6
RoraP51448 Gm12621-201ENSMUST00000177760 382 ntBASIC11.29□□□□□ -0.6
RoraP51448 Gm12615-201ENSMUST00000177970 382 ntBASIC11.29□□□□□ -0.6
RoraP51448 Gm12622-201ENSMUST00000177975 382 ntBASIC11.29□□□□□ -0.6
RoraP51448 Gm12627-201ENSMUST00000178412 382 ntBASIC11.29□□□□□ -0.6
RoraP51448 Gm12625-201ENSMUST00000179122 382 ntBASIC11.29□□□□□ -0.6
RoraP51448 Gm12614-201ENSMUST00000179586 382 ntBASIC11.29□□□□□ -0.6
RoraP51448 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RoraP51448 Gm12613-201ENSMUST00000180323 382 ntBASIC11.29□□□□□ -0.6
RoraP51448 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Gm8100-201ENSMUST00000182906 988 ntBASIC11.29□□□□□ -0.6
RoraP51448 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.29□□□□□ -0.6
RoraP51448 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Gm2965-201ENSMUST00000198365 343 ntBASIC11.29□□□□□ -0.6
RoraP51448 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.29□□□□□ -0.6
RoraP51448 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.29□□□□□ -0.6
RoraP51448 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RoraP51448 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RoraP51448 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.28□□□□□ -0.6
RoraP51448 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.28□□□□□ -0.6
RoraP51448 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.28□□□□□ -0.6
RoraP51448 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.28□□□□□ -0.6
RoraP51448 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RoraP51448 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.28□□□□□ -0.6
RoraP51448 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.28□□□□□ -0.6
RoraP51448 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
RoraP51448 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.28□□□□□ -0.6
RoraP51448 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Gm5419-201ENSMUST00000119301 527 ntBASIC11.28□□□□□ -0.6
RoraP51448 Gm8566-201ENSMUST00000120174 465 ntBASIC11.28□□□□□ -0.6
RoraP51448 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.28□□□□□ -0.6
RoraP51448 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.28□□□□□ -0.6
RoraP51448 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
RoraP51448 Gm1821-202ENSMUST00000227415 750 ntBASIC11.28□□□□□ -0.6
RoraP51448 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Gm5705-201ENSMUST00000066241 711 ntBASIC11.28□□□□□ -0.6
RoraP51448 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Matn2-203ENSMUST00000226766 3252 ntBASIC11.28□□□□□ -0.6
RoraP51448 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RoraP51448 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms