Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shmt1P50431 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.55□□□□□ -0.4
Shmt1P50431 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Shmt1P50431 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.55□□□□□ -0.4
Shmt1P50431 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Shmt1P50431 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Shmt1P50431 Gm12165-201ENSMUST00000117047 342 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 Gm11941-201ENSMUST00000119904 610 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.55□□□□□ -0.4
Shmt1P50431 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.55□□□□□ -0.4
Shmt1P50431 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.55□□□□□ -0.4
Shmt1P50431 Gm23085-201ENSMUST00000157849 293 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Gm9211-201ENSMUST00000182882 975 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 Gm6867-201ENSMUST00000219165 425 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 Gm29787-201ENSMUST00000222129 849 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 Gm1821-202ENSMUST00000227415 750 ntBASIC12.55□□□□□ -0.4
Shmt1P50431 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Shmt1P50431 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Shmt1P50431 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Shmt1P50431 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Shmt1P50431 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Shmt1P50431 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Shmt1P50431 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shmt1P50431 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.54□□□□□ -0.4
Shmt1P50431 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Shmt1P50431 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.54□□□□□ -0.4
Shmt1P50431 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.54□□□□□ -0.4
Shmt1P50431 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Shmt1P50431 Gm12616-201ENSMUST00000118594 382 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm15207-201ENSMUST00000119259 442 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm15595-201ENSMUST00000120840 961 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Shmt1P50431 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.54□□□□□ -0.4
Shmt1P50431 Gm12624-201ENSMUST00000177615 382 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm12621-201ENSMUST00000177760 382 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm12615-201ENSMUST00000177970 382 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm12622-201ENSMUST00000177975 382 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm12627-201ENSMUST00000178412 382 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm12625-201ENSMUST00000179122 382 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm12614-201ENSMUST00000179586 382 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Gm12613-201ENSMUST00000180323 382 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.54□□□□□ -0.4
Shmt1P50431 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Shmt1P50431 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Shmt1P50431 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.54□□□□□ -0.4
Shmt1P50431 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.54□□□□□ -0.4
Shmt1P50431 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Shmt1P50431 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Shmt1P50431 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shmt1P50431 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Shmt1P50431 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Shmt1P50431 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Shmt1P50431 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms