Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.14□□□□□ -0.47
SftpbP50405 Gm15610-201ENSMUST00000120584 195 ntBASIC12.14□□□□□ -0.47
SftpbP50405 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Snora78-201ENSMUST00000158630 128 ntBASIC12.14□□□□□ -0.47
SftpbP50405 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.14□□□□□ -0.47
SftpbP50405 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.14□□□□□ -0.47
SftpbP50405 Gm18187-201ENSMUST00000196476 984 ntBASIC12.14□□□□□ -0.47
SftpbP50405 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.14□□□□□ -0.47
SftpbP50405 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.14□□□□□ -0.47
SftpbP50405 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
SftpbP50405 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.14□□□□□ -0.47
SftpbP50405 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.14□□□□□ -0.47
SftpbP50405 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
SftpbP50405 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.14□□□□□ -0.47
SftpbP50405 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.14□□□□□ -0.47
SftpbP50405 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SftpbP50405 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SftpbP50405 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
SftpbP50405 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.13□□□□□ -0.47
SftpbP50405 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SftpbP50405 Gm7722-201ENSMUST00000120646 741 ntBASIC12.13□□□□□ -0.47
SftpbP50405 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.13□□□□□ -0.47
SftpbP50405 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.13□□□□□ -0.47
SftpbP50405 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.13□□□□□ -0.47
SftpbP50405 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SftpbP50405 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.13□□□□□ -0.47
SftpbP50405 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.13□□□□□ -0.47
SftpbP50405 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.13□□□□□ -0.47
SftpbP50405 Gm10608-202ENSMUST00000213924 676 ntBASIC12.13□□□□□ -0.47
SftpbP50405 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SftpbP50405 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.13□□□□□ -0.47
SftpbP50405 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.13□□□□□ -0.47
SftpbP50405 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpbP50405 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.12□□□□□ -0.47
SftpbP50405 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.12□□□□□ -0.47
SftpbP50405 Gm12164-201ENSMUST00000121695 551 ntBASIC12.12□□□□□ -0.47
SftpbP50405 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.12□□□□□ -0.47
SftpbP50405 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.12□□□□□ -0.47
SftpbP50405 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.12□□□□□ -0.47
SftpbP50405 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.12□□□□□ -0.47
SftpbP50405 Morn2-202ENSMUST00000227729 656 ntBASIC12.12□□□□□ -0.47
SftpbP50405 Gm9823-201ENSMUST00000051212 327 ntBASIC12.12□□□□□ -0.47
SftpbP50405 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.12□□□□□ -0.47
SftpbP50405 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.12□□□□□ -0.47
SftpbP50405 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SftpbP50405 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpbP50405 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms