Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
Nkx2-1P50220 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm4984-201ENSMUST00000115987 360 ntBASIC9.83□□□□□ -0.84
Nkx2-1P50220 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm45930-201ENSMUST00000221330 292 ntBASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm6091-201ENSMUST00000098307 165 ntBASIC9.83□□□□□ -0.84
Nkx2-1P50220 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.83□□□□□ -0.84
Nkx2-1P50220 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.83□□□□□ -0.84
Nkx2-1P50220 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.83□□□□□ -0.84
Nkx2-1P50220 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.83□□□□□ -0.84
Nkx2-1P50220 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nkx2-1P50220 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.82□□□□□ -0.84
Nkx2-1P50220 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.82□□□□□ -0.84
Nkx2-1P50220 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Gm11424-201ENSMUST00000121929 829 ntBASIC9.82□□□□□ -0.84
Nkx2-1P50220 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Gm26927-201ENSMUST00000182385 965 ntBASIC9.82□□□□□ -0.84
Nkx2-1P50220 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Gm9136-201ENSMUST00000193368 454 ntBASIC9.82□□□□□ -0.84
Nkx2-1P50220 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.82□□□□□ -0.84
Nkx2-1P50220 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Gm5781-201ENSMUST00000219792 443 ntBASIC9.82□□□□□ -0.84
Nkx2-1P50220 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms