Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Rfx3P48381 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.75□□□□□ -0.69
Rfx3P48381 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rfx3P48381 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rfx3P48381 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Rfx3P48381 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rfx3P48381 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Rfx3P48381 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Rfx3P48381 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Rfx3P48381 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.74□□□□□ -0.69
Rfx3P48381 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm26956-201ENSMUST00000182176 986 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Gm29396-201ENSMUST00000185659 716 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm18054-201ENSMUST00000207539 555 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Gm5950-201ENSMUST00000213337 772 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rfx3P48381 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm9823-201ENSMUST00000051212 327 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Rfx3P48381 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.74□□□□□ -0.69
Rfx3P48381 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rfx3P48381 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.74□□□□□ -0.69
Rfx3P48381 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfx3P48381 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.74□□□□□ -0.69
Rfx3P48381 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.73□□□□□ -0.69
Rfx3P48381 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Rfx3P48381 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rfx3P48381 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rfx3P48381 Gm15370-201ENSMUST00000117158 253 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Gm15198-201ENSMUST00000117283 177 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Gm13297-201ENSMUST00000120205 934 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.73□□□□□ -0.69
Rfx3P48381 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.73□□□□□ -0.69
Rfx3P48381 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms