Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.46□□□□□ -0.57
Tnfsf4P43488 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Gm38002-201ENSMUST00000193255 180 ntBASIC11.46□□□□□ -0.57
Tnfsf4P43488 Gm18893-201ENSMUST00000198416 943 ntBASIC11.46□□□□□ -0.57
Tnfsf4P43488 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Morn2-202ENSMUST00000227729 656 ntBASIC11.46□□□□□ -0.57
Tnfsf4P43488 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.46□□□□□ -0.58
Tnfsf4P43488 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf4P43488 Rgr-203ENSMUST00000225070 4704 ntBASIC11.45□□□□□ -0.58
Tnfsf4P43488 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.45□□□□□ -0.58
Tnfsf4P43488 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Gm19309-201ENSMUST00000218295 205 ntBASIC11.45□□□□□ -0.58
Tnfsf4P43488 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfsf4P43488 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.45□□□□□ -0.58
Tnfsf4P43488 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf4P43488 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.44□□□□□ -0.58
Tnfsf4P43488 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm7046-201ENSMUST00000221351 977 ntBASIC11.44□□□□□ -0.58
Tnfsf4P43488 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.44□□□□□ -0.58
Tnfsf4P43488 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.44□□□□□ -0.58
Tnfsf4P43488 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms