Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf1P39428 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf1P39428 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Traf1P39428 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf1P39428 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Traf1P39428 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Traf1P39428 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Traf1P39428 Gm13461-201ENSMUST00000120980 662 ntBASIC13.78□□□□□ -0.2
Traf1P39428 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Gm24514-201ENSMUST00000174961 285 ntBASIC13.78□□□□□ -0.2
Traf1P39428 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.78□□□□□ -0.2
Traf1P39428 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.78□□□□□ -0.2
Traf1P39428 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Traf1P39428 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Traf1P39428 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Traf1P39428 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.78□□□□□ -0.2
Traf1P39428 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Traf1P39428 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Traf1P39428 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Traf1P39428 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Traf1P39428 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.78□□□□□ -0.2
Traf1P39428 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
Traf1P39428 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.77□□□□□ -0.2
Traf1P39428 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Traf1P39428 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Traf1P39428 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.77□□□□□ -0.21
Traf1P39428 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Gm27390-201ENSMUST00000184516 176 ntBASIC13.77□□□□□ -0.21
Traf1P39428 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.77□□□□□ -0.21
Traf1P39428 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.77□□□□□ -0.21
Traf1P39428 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.77□□□□□ -0.21
Traf1P39428 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.77□□□□□ -0.21
Traf1P39428 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.77□□□□□ -0.21
Traf1P39428 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.77□□□□□ -0.21
Traf1P39428 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.77□□□□□ -0.21
Traf1P39428 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Traf1P39428 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Traf1P39428 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Traf1P39428 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Traf1P39428 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.76□□□□□ -0.21
Traf1P39428 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Traf1P39428 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Traf1P39428 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Traf1P39428 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms