Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.17□□□□□ -0.46
Mmp13P33435 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.17□□□□□ -0.46
Mmp13P33435 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Mmp13P33435 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.16□□□□□ -0.46
Mmp13P33435 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.16□□□□□ -0.46
Mmp13P33435 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.16□□□□□ -0.46
Mmp13P33435 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Mmp13P33435 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Mmp13P33435 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.16□□□□□ -0.46
Mmp13P33435 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Gm22323-201ENSMUST00000103832 109 ntBASIC12.16□□□□□ -0.46
Mmp13P33435 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.16□□□□□ -0.46
Mmp13P33435 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.16□□□□□ -0.46
Mmp13P33435 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.16□□□□□ -0.46
Mmp13P33435 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.16□□□□□ -0.46
Mmp13P33435 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.16□□□□□ -0.46
Mmp13P33435 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.16□□□□□ -0.46
Mmp13P33435 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Mmp13P33435 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp13P33435 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.15□□□□□ -0.46
Mmp13P33435 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Mmp13P33435 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Mmp13P33435 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Gm11930-201ENSMUST00000117788 190 ntBASIC12.15□□□□□ -0.46
Mmp13P33435 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.15□□□□□ -0.46
Mmp13P33435 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Mmp13P33435 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.15□□□□□ -0.46
Mmp13P33435 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Mmp13P33435 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.15□□□□□ -0.46
Mmp13P33435 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp13P33435 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.15□□□□□ -0.47
Mmp13P33435 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Mmp13P33435 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp13P33435 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp13P33435 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.15□□□□□ -0.47
Mmp13P33435 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Mmp13P33435 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Mmp13P33435 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Mmp13P33435 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Mmp13P33435 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.14□□□□□ -0.47
Mmp13P33435 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.14□□□□□ -0.47
Mmp13P33435 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.14□□□□□ -0.47
Mmp13P33435 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.14□□□□□ -0.47
Mmp13P33435 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Mmp13P33435 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms