Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm23596-201ENSMUST00000104304 132 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm23912-201ENSMUST00000104687 87 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm13611-201ENSMUST00000118269 318 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm12196-201ENSMUST00000120954 262 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Mir1943-201ENSMUST00000158276 73 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm24514-201ENSMUST00000174961 285 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm9211-201ENSMUST00000182882 975 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.56□□□□□ -0.56
Hoxc11P31313 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxc11P31313 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Hoxc11P31313 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc11P31313 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxc11P31313 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm13045-201ENSMUST00000119019 712 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm13408-201ENSMUST00000119822 798 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm13935-201ENSMUST00000121859 798 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.55□□□□□ -0.56
Hoxc11P31313 Rprl1-201ENSMUST00000158050 327 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm23699-201ENSMUST00000158835 135 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm9550-201ENSMUST00000161130 862 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm8343-201ENSMUST00000182705 994 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm4482-201ENSMUST00000200876 742 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm4157-201ENSMUST00000211647 679 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm26448-201ENSMUST00000082446 203 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxc11P31313 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.55□□□□□ -0.56
Hoxc11P31313 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxc11P31313 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc11P31313 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms