Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.32□□□□□ -0.28
Col2a1P28481 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.31□□□□□ -0.28
Col2a1P28481 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.31□□□□□ -0.28
Col2a1P28481 Gm8302-201ENSMUST00000119217 852 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Gm12791-201ENSMUST00000120788 655 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.31□□□□□ -0.28
Col2a1P28481 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Gm29155-201ENSMUST00000185910 269 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Gm37284-201ENSMUST00000193607 539 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Gm43002-201ENSMUST00000200310 155 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Gm9139-201ENSMUST00000218817 700 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.31□□□□□ -0.28
Col2a1P28481 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.31□□□□□ -0.28
Col2a1P28481 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col2a1P28481 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col2a1P28481 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col2a1P28481 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col2a1P28481 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col2a1P28481 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.3□□□□□ -0.28
Col2a1P28481 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.3□□□□□ -0.28
Col2a1P28481 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.3□□□□□ -0.28
Col2a1P28481 Olfml3-204ENSMUST00000169286 874 ntBASIC13.3□□□□□ -0.28
Col2a1P28481 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.3□□□□□ -0.28
Col2a1P28481 Gm43380-201ENSMUST00000200421 220 ntBASIC13.3□□□□□ -0.28
Col2a1P28481 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.3□□□□□ -0.28
Col2a1P28481 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col2a1P28481 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.3□□□□□ -0.28
Col2a1P28481 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.3□□□□□ -0.28
Col2a1P28481 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.3□□□□□ -0.28
Col2a1P28481 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.3□□□□□ -0.28
Col2a1P28481 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col2a1P28481 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.3□□□□□ -0.28
Col2a1P28481 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col2a1P28481 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 Gm14219-201ENSMUST00000120414 288 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Gm13117-201ENSMUST00000120894 691 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Col2a1P28481 Gm30946-201ENSMUST00000198288 724 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Gm3793-201ENSMUST00000204973 672 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Gm19091-201ENSMUST00000208120 978 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms