Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Cdx1P18111 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Cdx1P18111 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.64□□□□□ -0.87
Cdx1P18111 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.64□□□□□ -0.87
Cdx1P18111 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cdx1P18111 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cdx1P18111 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cdx1P18111 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cdx1P18111 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Gm37008-201ENSMUST00000195712 319 ntBASIC9.64□□□□□ -0.87
Cdx1P18111 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.64□□□□□ -0.87
Cdx1P18111 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.64□□□□□ -0.87
Cdx1P18111 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Snora73a-201ENSMUST00000082453 205 ntBASIC9.64□□□□□ -0.87
Cdx1P18111 Gm10268-201ENSMUST00000085340 555 ntBASIC9.64□□□□□ -0.87
Cdx1P18111 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.64□□□□□ -0.87
Cdx1P18111 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.64□□□□□ -0.87
Cdx1P18111 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cdx1P18111 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx1P18111 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.64□□□□□ -0.87
Cdx1P18111 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cdx1P18111 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Cdx1P18111 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.63□□□□□ -0.87
Cdx1P18111 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.63□□□□□ -0.87
Cdx1P18111 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.63□□□□□ -0.87
Cdx1P18111 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.63□□□□□ -0.87
Cdx1P18111 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Cdx1P18111 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.63□□□□□ -0.87
Cdx1P18111 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Cdx1P18111 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Cdx1P18111 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cdx1P18111 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cdx1P18111 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cdx1P18111 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cdx1P18111 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cdx1P18111 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cdx1P18111 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.62□□□□□ -0.87
Cdx1P18111 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cdx1P18111 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cdx1P18111 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cdx1P18111 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.62□□□□□ -0.87
Cdx1P18111 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms