Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Gm17812-201ENSMUST00000204935 318 ntBASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp6P0C0A3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Gm8385-201ENSMUST00000058999 643 ntBASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Chmp6P0C0A3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Gm14277-201ENSMUST00000121195 360 ntBASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Gm45433-201ENSMUST00000209386 247 ntBASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Gm8913-201ENSMUST00000209491 641 ntBASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms