Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 n-R5s185-201ENSMUST00000083953 119 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 AC130823.1-201ENSMUST00000228929 1549 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Gm13600-201ENSMUST00000117949 744 ntBASIC15.3■□□□□ 0.04
Hoxc9P09633 Gm15374-201ENSMUST00000119313 844 ntBASIC15.3■□□□□ 0.04
Hoxc9P09633 Gm15329-201ENSMUST00000121408 155 ntBASIC15.3■□□□□ 0.04
Hoxc9P09633 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hoxc9P09633 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC15.3■□□□□ 0.04
Hoxc9P09633 Gm38089-201ENSMUST00000193585 1514 ntBASIC15.3■□□□□ 0.04
Hoxc9P09633 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC15.3■□□□□ 0.04
Hoxc9P09633 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC15.3■□□□□ 0.04
Hoxc9P09633 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Hoxc9P09633 Gm45592-201ENSMUST00000209605 1043 ntBASIC15.3■□□□□ 0.04
Hoxc9P09633 Gm8436-201ENSMUST00000210152 1080 ntBASIC15.3■□□□□ 0.04
Hoxc9P09633 Gm5749-201ENSMUST00000210673 1090 ntBASIC15.3■□□□□ 0.04
Hoxc9P09633 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC15.3■□□□□ 0.04
Hoxc9P09633 Gm19046-201ENSMUST00000221263 1298 ntBASIC15.3■□□□□ 0.04
Hoxc9P09633 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hoxc9P09633 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hoxc9P09633 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hoxc9P09633 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hoxc9P09633 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Gm11801-201ENSMUST00000117807 746 ntBASIC15.29■□□□□ 0.04
Hoxc9P09633 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Gm38314-201ENSMUST00000195709 625 ntBASIC15.29■□□□□ 0.04
Hoxc9P09633 Gm43380-201ENSMUST00000200421 220 ntBASIC15.29■□□□□ 0.04
Hoxc9P09633 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC15.29■□□□□ 0.04
Hoxc9P09633 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Gm5468-202ENSMUST00000227851 682 ntBASIC15.29■□□□□ 0.04
Hoxc9P09633 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Hoxc9P09633 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hoxc9P09633 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms