Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TnfP06804 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TnfP06804 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.59□□□□□ -0.39
TnfP06804 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.59□□□□□ -0.39
TnfP06804 Gm15352-201ENSMUST00000118696 270 ntBASIC12.59□□□□□ -0.39
TnfP06804 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Gm9540-201ENSMUST00000188230 478 ntBASIC12.59□□□□□ -0.39
TnfP06804 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.59□□□□□ -0.39
TnfP06804 Gm5051-201ENSMUST00000204085 485 ntBASIC12.59□□□□□ -0.39
TnfP06804 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Gm9132-201ENSMUST00000210182 832 ntBASIC12.59□□□□□ -0.39
TnfP06804 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Gm7940-201ENSMUST00000218195 769 ntBASIC12.59□□□□□ -0.39
TnfP06804 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.59□□□□□ -0.39
TnfP06804 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TnfP06804 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TnfP06804 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TnfP06804 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TnfP06804 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TnfP06804 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.58□□□□□ -0.4
TnfP06804 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.58□□□□□ -0.4
TnfP06804 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TnfP06804 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.58□□□□□ -0.4
TnfP06804 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.58□□□□□ -0.4
TnfP06804 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.58□□□□□ -0.4
TnfP06804 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
TnfP06804 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.58□□□□□ -0.4
TnfP06804 Gm45113-201ENSMUST00000207518 165 ntBASIC12.58□□□□□ -0.4
TnfP06804 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
TnfP06804 Gm45398-201ENSMUST00000210561 165 ntBASIC12.58□□□□□ -0.4
TnfP06804 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.58□□□□□ -0.4
TnfP06804 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.58□□□□□ -0.4
TnfP06804 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Gm10179-201ENSMUST00000086233 688 ntBASIC12.58□□□□□ -0.4
TnfP06804 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TnfP06804 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TnfP06804 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.58□□□□□ -0.4
TnfP06804 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.58□□□□□ -0.4
TnfP06804 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TnfP06804 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnfP06804 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TnfP06804 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.57□□□□□ -0.4
TnfP06804 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TnfP06804 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 327.4 ms