Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.71□□□□□ -0.53
Hoxa4P06798 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Hoxa4P06798 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.71□□□□□ -0.53
Hoxa4P06798 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.71□□□□□ -0.53
Hoxa4P06798 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.71□□□□□ -0.53
Hoxa4P06798 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa4P06798 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa4P06798 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hoxa4P06798 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa4P06798 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa4P06798 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa4P06798 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.71□□□□□ -0.54
Hoxa4P06798 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Hoxa4P06798 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa4P06798 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Hoxa4P06798 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Hoxa4P06798 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Hoxa4P06798 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa4P06798 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.7□□□□□ -0.54
Hoxa4P06798 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.7□□□□□ -0.54
Hoxa4P06798 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.7□□□□□ -0.54
Hoxa4P06798 Gm26461-201ENSMUST00000175064 290 ntBASIC11.7□□□□□ -0.54
Hoxa4P06798 Mir3102-201ENSMUST00000175555 104 ntBASIC11.7□□□□□ -0.54
Hoxa4P06798 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.7□□□□□ -0.54
Hoxa4P06798 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.7□□□□□ -0.54
Hoxa4P06798 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.7□□□□□ -0.54
Hoxa4P06798 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Gm6108-201ENSMUST00000208365 367 ntBASIC11.7□□□□□ -0.54
Hoxa4P06798 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.7□□□□□ -0.54
Hoxa4P06798 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa4P06798 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa4P06798 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hoxa4P06798 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm23251-201ENSMUST00000103773 110 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm13809-201ENSMUST00000117921 597 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm11783-201ENSMUST00000119549 885 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.69□□□□□ -0.54
Hoxa4P06798 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Ntng1-201ENSMUST00000051253 327 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms