Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ubr1O70481 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Gm9244-201ENSMUST00000056767 2129 ntBASIC15.14■□□□□ 0.01
Ubr1O70481 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Mir1905-201ENSMUST00000122779 82 ntBASIC15.13■□□□□ 0.01
Ubr1O70481 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Gm37284-201ENSMUST00000193607 539 ntBASIC15.13■□□□□ 0.01
Ubr1O70481 Gm35713-201ENSMUST00000210516 199 ntBASIC15.13■□□□□ 0.01
Ubr1O70481 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ubr1O70481 AC130477.1-201ENSMUST00000226982 420 ntBASIC15.13■□□□□ 0.01
Ubr1O70481 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Gm10254-201ENSMUST00000052888 867 ntBASIC15.13■□□□□ 0.01
Ubr1O70481 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ubr1O70481 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ubr1O70481 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.13■□□□□ 0.01
Ubr1O70481 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ubr1O70481 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC15.13■□□□□ 0.01
Ubr1O70481 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ubr1O70481 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Ubr1O70481 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC15.13■□□□□ 0.01
Ubr1O70481 Gm43002-201ENSMUST00000200310 155 ntBASIC15.13■□□□□ 0.01
Ubr1O70481 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubr1O70481 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.13■□□□□ 0.01
Ubr1O70481 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC15.12■□□□□ 0.01
Ubr1O70481 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC15.12■□□□□ 0.01
Ubr1O70481 Gm42430-201ENSMUST00000197209 616 ntBASIC15.12■□□□□ 0.01
Ubr1O70481 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 CT030170.2-201ENSMUST00000223267 126 ntBASIC15.12■□□□□ 0.01
Ubr1O70481 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ubr1O70481 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.12■□□□□ 0.01
Ubr1O70481 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Gm6024-201ENSMUST00000117850 1558 ntBASIC15.12■□□□□ 0.01
Ubr1O70481 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.12■□□□□ 0.01
Ubr1O70481 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubr1O70481 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ubr1O70481 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Gm9133-201ENSMUST00000118289 540 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ubr1O70481 Gm7719-201ENSMUST00000182374 975 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Gm5298-201ENSMUST00000201122 892 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC15.11■□□□□ 0.01
Ubr1O70481 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Gm5434-202ENSMUST00000222384 1451 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Gm5434-201ENSMUST00000071825 1451 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Gm44106-201ENSMUST00000203153 1599 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.11■□□□□ 0.01
Ubr1O70481 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ubr1O70481 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Ubr1O70481 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Gm9915-201ENSMUST00000066196 1383 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 212.2 ms