Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ChkaO54804 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ChkaO54804 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ChkaO54804 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ChkaO54804 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ChkaO54804 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ChkaO54804 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ChkaO54804 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ChkaO54804 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Gm43102-201ENSMUST00000201004 2324 ntBASIC12□□□□□ -0.49
ChkaO54804 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12□□□□□ -0.49
ChkaO54804 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
ChkaO54804 Gm6157-201ENSMUST00000199935 1897 ntBASIC12□□□□□ -0.49
ChkaO54804 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
ChkaO54804 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12□□□□□ -0.49
ChkaO54804 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12□□□□□ -0.49
ChkaO54804 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12□□□□□ -0.49
ChkaO54804 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12□□□□□ -0.49
ChkaO54804 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12□□□□□ -0.49
ChkaO54804 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12□□□□□ -0.49
ChkaO54804 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12□□□□□ -0.49
ChkaO54804 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Gm9230-201ENSMUST00000188228 532 ntBASIC12□□□□□ -0.49
ChkaO54804 Gm38241-201ENSMUST00000192641 898 ntBASIC12□□□□□ -0.49
ChkaO54804 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12□□□□□ -0.49
ChkaO54804 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12□□□□□ -0.49
ChkaO54804 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12□□□□□ -0.49
ChkaO54804 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12□□□□□ -0.49
ChkaO54804 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Cts7-204ENSMUST00000225321 1257 ntBASIC12□□□□□ -0.49
ChkaO54804 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12□□□□□ -0.49
ChkaO54804 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ChkaO54804 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Gm5847-201ENSMUST00000178959 1595 ntBASIC12□□□□□ -0.49
ChkaO54804 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Gm43860-201ENSMUST00000201742 2705 ntBASIC12□□□□□ -0.49
ChkaO54804 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ChkaO54804 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ChkaO54804 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12□□□□□ -0.49
ChkaO54804 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12□□□□□ -0.49
ChkaO54804 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ChkaO54804 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.99□□□□□ -0.49
ChkaO54804 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ChkaO54804 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
ChkaO54804 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.99□□□□□ -0.49
ChkaO54804 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ChkaO54804 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.99□□□□□ -0.49
ChkaO54804 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.99□□□□□ -0.49
ChkaO54804 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.99□□□□□ -0.49
ChkaO54804 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.99□□□□□ -0.49
ChkaO54804 Gm2991-201ENSMUST00000173338 480 ntBASIC11.99□□□□□ -0.49
ChkaO54804 Gm5070-201ENSMUST00000177599 862 ntBASIC11.99□□□□□ -0.49
ChkaO54804 Gm9192-201ENSMUST00000183221 985 ntBASIC11.99□□□□□ -0.49
ChkaO54804 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.99□□□□□ -0.49
ChkaO54804 Gm45865-201ENSMUST00000211815 945 ntBASIC11.99□□□□□ -0.49
ChkaO54804 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.99□□□□□ -0.49
ChkaO54804 Gm9899-201ENSMUST00000065519 555 ntBASIC11.99□□□□□ -0.49
ChkaO54804 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ChkaO54804 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.99□□□□□ -0.49
ChkaO54804 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.99□□□□□ -0.49
ChkaO54804 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ChkaO54804 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms