Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.9□□□□□ -0.18
Tcof1O08784 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.9□□□□□ -0.18
Tcof1O08784 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Tcof1O08784 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Tcof1O08784 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Tcof1O08784 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.9□□□□□ -0.18
Tcof1O08784 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Tcof1O08784 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.9□□□□□ -0.18
Tcof1O08784 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.9□□□□□ -0.18
Tcof1O08784 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tcof1O08784 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Tcof1O08784 Gm11663-201ENSMUST00000117888 290 ntBASIC13.9□□□□□ -0.19
Tcof1O08784 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.9□□□□□ -0.19
Tcof1O08784 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tcof1O08784 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.9□□□□□ -0.19
Tcof1O08784 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.9□□□□□ -0.19
Tcof1O08784 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.9□□□□□ -0.19
Tcof1O08784 Gm38117-201ENSMUST00000194653 939 ntBASIC13.9□□□□□ -0.19
Tcof1O08784 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.9□□□□□ -0.19
Tcof1O08784 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.9□□□□□ -0.19
Tcof1O08784 Gm45575-201ENSMUST00000210283 548 ntBASIC13.9□□□□□ -0.19
Tcof1O08784 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.9□□□□□ -0.19
Tcof1O08784 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.9□□□□□ -0.19
Tcof1O08784 Gm10288-201ENSMUST00000084614 537 ntBASIC13.9□□□□□ -0.19
Tcof1O08784 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Tcof1O08784 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.89□□□□□ -0.19
Tcof1O08784 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tcof1O08784 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Tcof1O08784 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tcof1O08784 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Tcof1O08784 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Gm12165-201ENSMUST00000117047 342 ntBASIC13.89□□□□□ -0.19
Tcof1O08784 Gm15782-201ENSMUST00000121073 445 ntBASIC13.89□□□□□ -0.19
Tcof1O08784 Gm14441-201ENSMUST00000121960 540 ntBASIC13.89□□□□□ -0.19
Tcof1O08784 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.89□□□□□ -0.19
Tcof1O08784 Gm23085-201ENSMUST00000157849 293 ntBASIC13.89□□□□□ -0.19
Tcof1O08784 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Tcof1O08784 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Tcof1O08784 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.89□□□□□ -0.19
Tcof1O08784 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.89□□□□□ -0.19
Tcof1O08784 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.89□□□□□ -0.19
Tcof1O08784 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Gm1821-202ENSMUST00000227415 750 ntBASIC13.89□□□□□ -0.19
Tcof1O08784 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.89□□□□□ -0.19
Tcof1O08784 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tcof1O08784 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tcof1O08784 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tcof1O08784 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tcof1O08784 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tcof1O08784 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tcof1O08784 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tcof1O08784 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.88□□□□□ -0.19
Tcof1O08784 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tcof1O08784 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tcof1O08784 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tcof1O08784 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms