Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AlyrefO08583 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.16□□□□□ -0.46
AlyrefO08583 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.16□□□□□ -0.46
AlyrefO08583 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AlyrefO08583 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
AlyrefO08583 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
AlyrefO08583 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.16□□□□□ -0.46
AlyrefO08583 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AlyrefO08583 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AlyrefO08583 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.16□□□□□ -0.46
AlyrefO08583 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
AlyrefO08583 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.16□□□□□ -0.46
AlyrefO08583 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AlyrefO08583 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
AlyrefO08583 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.16□□□□□ -0.46
AlyrefO08583 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AlyrefO08583 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AlyrefO08583 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
AlyrefO08583 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
AlyrefO08583 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm12736-201ENSMUST00000119330 236 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 Gm14213-201ENSMUST00000119778 768 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 Gm13204-201ENSMUST00000120110 821 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AlyrefO08583 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC12.15□□□□□ -0.46
AlyrefO08583 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm22388-201ENSMUST00000158194 248 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.15□□□□□ -0.46
AlyrefO08583 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.15□□□□□ -0.46
AlyrefO08583 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
AlyrefO08583 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
AlyrefO08583 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
AlyrefO08583 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
AlyrefO08583 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
AlyrefO08583 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AlyrefO08583 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
AlyrefO08583 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
AlyrefO08583 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.15□□□□□ -0.47
AlyrefO08583 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
AlyrefO08583 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
AlyrefO08583 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.14□□□□□ -0.47
AlyrefO08583 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.14□□□□□ -0.47
AlyrefO08583 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
AlyrefO08583 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AlyrefO08583 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
AlyrefO08583 Gm14193-201ENSMUST00000105067 153 ntBASIC12.14□□□□□ -0.47
AlyrefO08583 Gm14993-201ENSMUST00000121180 164 ntBASIC12.14□□□□□ -0.47
AlyrefO08583 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms