Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Mir7051-201ENSMUST00000184167 73 ntBASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 n-R5s185-201ENSMUST00000083953 119 ntBASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Gm12663-201ENSMUST00000118481 958 ntBASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Gm15036-201ENSMUST00000118880 400 ntBASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Gm16219-201ENSMUST00000120096 274 ntBASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Gm13284-201ENSMUST00000121020 547 ntBASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Gm45758-201ENSMUST00000212448 1006 ntBASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Gm45856-201ENSMUST00000212752 416 ntBASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc180J3QNE4 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc180J3QNE4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc180J3QNE4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc180J3QNE4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc180J3QNE4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc180J3QNE4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc180J3QNE4 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Gm42433-201ENSMUST00000196806 940 ntBASIC21.33■■□□□ 1
Ccdc180J3QNE4 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
Ccdc180J3QNE4 AC122891.1-201ENSMUST00000218671 268 ntBASIC21.33■■□□□ 1
Ccdc180J3QNE4 AC130477.1-201ENSMUST00000226982 420 ntBASIC21.33■■□□□ 1
Ccdc180J3QNE4 AC156501.1-201ENSMUST00000228219 270 ntBASIC21.33■■□□□ 1
Ccdc180J3QNE4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc180J3QNE4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccdc180J3QNE4 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC21.32■■□□□ 1
Ccdc180J3QNE4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Mir1905-201ENSMUST00000122779 82 ntBASIC21.32■■□□□ 1
Ccdc180J3QNE4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Gm24992-201ENSMUST00000157412 130 ntBASIC21.32■■□□□ 1
Ccdc180J3QNE4 Gm30946-201ENSMUST00000198288 724 ntBASIC21.32■■□□□ 1
Ccdc180J3QNE4 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Gm18035-201ENSMUST00000211962 589 ntBASIC21.32■■□□□ 1
Ccdc180J3QNE4 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC21.32■■□□□ 1
Ccdc180J3QNE4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc180J3QNE4 Gm19817-201ENSMUST00000199764 2132 ntBASIC21.32■■□□□ 1
Ccdc180J3QNE4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm25562-201ENSMUST00000104608 133 ntBASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm13445-201ENSMUST00000121664 307 ntBASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm22379-201ENSMUST00000157480 131 ntBASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm26989-201ENSMUST00000182608 749 ntBASIC21.31■■□□□ 1
Ccdc180J3QNE4 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm6390-201ENSMUST00000215034 589 ntBASIC21.31■■□□□ 1
Ccdc180J3QNE4 AC154305.2-201ENSMUST00000225813 901 ntBASIC21.31■■□□□ 1
Ccdc180J3QNE4 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm7841-201ENSMUST00000122108 1629 ntBASIC21.31■■□□□ 1
Ccdc180J3QNE4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm14270-201ENSMUST00000118388 846 ntBASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms