Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh1F7BJK1 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.71□□□□□ -0.7
Pcdh1F7BJK1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh1F7BJK1 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh1F7BJK1 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Gm16379-201ENSMUST00000161469 348 ntBASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Gm28882-201ENSMUST00000185504 314 ntBASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Gm8762-201ENSMUST00000193486 339 ntBASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh1F7BJK1 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gm14660-201ENSMUST00000119809 575 ntBASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gm12164-201ENSMUST00000121695 551 ntBASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gm13316-201ENSMUST00000140537 691 ntBASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms