Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.22□□□□□ -0.45
Atf6F6VAN0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.22□□□□□ -0.45
Atf6F6VAN0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm25700-201ENSMUST00000177693 110 ntBASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.22□□□□□ -0.45
Atf6F6VAN0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.22□□□□□ -0.45
Atf6F6VAN0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6F6VAN0 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Gm7584-201ENSMUST00000175829 940 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Gm38317-201ENSMUST00000195564 343 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Gm42660-201ENSMUST00000197733 947 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Gm43962-201ENSMUST00000203898 190 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Gm4607-201ENSMUST00000206649 577 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Gm13097-201ENSMUST00000210722 397 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Gm5455-201ENSMUST00000058710 715 ntBASIC12.21□□□□□ -0.45
Atf6F6VAN0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.21□□□□□ -0.45
Atf6F6VAN0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6F6VAN0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Atf6F6VAN0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.21□□□□□ -0.46
Atf6F6VAN0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6F6VAN0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.21□□□□□ -0.46
Atf6F6VAN0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6F6VAN0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6F6VAN0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6F6VAN0 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.21□□□□□ -0.46
Atf6F6VAN0 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.21□□□□□ -0.46
Atf6F6VAN0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms