Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm23596-201ENSMUST00000104304 132 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm14277-201ENSMUST00000121195 360 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm4310-201ENSMUST00000177847 889 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm28686-201ENSMUST00000187404 609 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm3332-201ENSMUST00000189337 928 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm18730-201ENSMUST00000218038 343 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cpsf4lE9Q2N0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Gm15236-201ENSMUST00000117309 379 ntBASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Gm14028-201ENSMUST00000117434 479 ntBASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Gm12997-201ENSMUST00000120207 640 ntBASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Gm24990-201ENSMUST00000157406 323 ntBASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Gm2553-201ENSMUST00000215986 605 ntBASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cpsf4lE9Q2N0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms