Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gm5706-201ENSMUST00000181525 993 ntBASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gm43133-201ENSMUST00000197472 463 ntBASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.73□□□□□ -0.69
H2afb3S4R1G7 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.73□□□□□ -0.69
H2afb3S4R1G7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.73□□□□□ -0.69
H2afb3S4R1G7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm15610-201ENSMUST00000120584 195 ntBASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm42627-201ENSMUST00000197347 224 ntBASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb3S4R1G7 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms