Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm37981-201ENSMUST00000194280 535 ntBASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm45398-201ENSMUST00000210561 165 ntBASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn8aQ9WTU3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Scn8aQ9WTU3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn8aQ9WTU3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Scn8aQ9WTU3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn8aQ9WTU3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Scn8aQ9WTU3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn8aQ9WTU3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Scn8aQ9WTU3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Scn8aQ9WTU3 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Gm3551-201ENSMUST00000190750 664 ntBASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Gm5996-201ENSMUST00000211110 718 ntBASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms