Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Prpf40aQ9R1C7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Prpf40aQ9R1C7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf40aQ9R1C7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf40aQ9R1C7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf40aQ9R1C7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf40aQ9R1C7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf40aQ9R1C7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf40aQ9R1C7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.16□□□□□ -0.3
Prpf40aQ9R1C7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gm12849-201ENSMUST00000120013 739 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gm25890-201ENSMUST00000177643 165 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gm22614-201ENSMUST00000178300 165 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gm32999-201ENSMUST00000192693 562 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gzmn-202ENSMUST00000225535 989 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 AC154757.2-201ENSMUST00000228885 743 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gm22042-201ENSMUST00000082989 165 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gm26110-201ENSMUST00000083971 165 ntBASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf40aQ9R1C7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.15□□□□□ -0.31
Prpf40aQ9R1C7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Gm26083-201ENSMUST00000157904 193 ntBASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Gm17376-201ENSMUST00000166016 84 ntBASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Mir6420-201ENSMUST00000185032 102 ntBASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Gm6082-201ENSMUST00000215204 454 ntBASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf40aQ9R1C7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms