Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Crlf1Q9JM58 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm15615-201ENSMUST00000118876 198 ntBASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm14213-201ENSMUST00000119778 768 ntBASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm26368-201ENSMUST00000157826 118 ntBASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm8574-201ENSMUST00000203207 924 ntBASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm18561-201ENSMUST00000206027 804 ntBASIC9.56□□□□□ -0.88
Crlf1Q9JM58 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Arhgef33-210ENSMUST00000225548 456 ntBASIC9.56□□□□□ -0.88
Crlf1Q9JM58 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.56□□□□□ -0.88
Crlf1Q9JM58 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Crlf1Q9JM58 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Crlf1Q9JM58 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms