Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm11439-201ENSMUST00000118598 409 ntBASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm27530-201ENSMUST00000184096 98 ntBASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Mir7677-201ENSMUST00000184226 67 ntBASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm18056-201ENSMUST00000207670 568 ntBASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm18061-201ENSMUST00000208350 562 ntBASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm18063-201ENSMUST00000208529 568 ntBASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm18052-201ENSMUST00000208750 559 ntBASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.78□□□□□ -0.68
Ldb3Q9JKS4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.77□□□□□ -0.68
Ldb3Q9JKS4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ldb3Q9JKS4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.77□□□□□ -0.68
Ldb3Q9JKS4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Ldb3Q9JKS4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ldb3Q9JKS4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ldb3Q9JKS4 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.77□□□□□ -0.68
Ldb3Q9JKS4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.77□□□□□ -0.68
Ldb3Q9JKS4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ldb3Q9JKS4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm23596-201ENSMUST00000104304 132 ntBASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm15236-201ENSMUST00000117309 379 ntBASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm4310-201ENSMUST00000177847 889 ntBASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm3332-201ENSMUST00000189337 928 ntBASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm18730-201ENSMUST00000218038 343 ntBASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ldb3Q9JKS4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms