Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Gm21778-201ENSMUST00000178779 471 ntBASIC11.75□□□□□ -0.53
OtofQ9ESF1 Gm9358-201ENSMUST00000183067 927 ntBASIC11.75□□□□□ -0.53
OtofQ9ESF1 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Mir8093-201ENSMUST00000185043 137 ntBASIC11.75□□□□□ -0.53
OtofQ9ESF1 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.75□□□□□ -0.53
OtofQ9ESF1 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.75□□□□□ -0.53
OtofQ9ESF1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.75□□□□□ -0.53
OtofQ9ESF1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
OtofQ9ESF1 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.75□□□□□ -0.53
OtofQ9ESF1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
OtofQ9ESF1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm14071-201ENSMUST00000117817 509 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm45120-201ENSMUST00000208880 408 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm9139-201ENSMUST00000218817 700 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm23105-201ENSMUST00000083719 134 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm15374-201ENSMUST00000119313 844 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm12030-201ENSMUST00000121917 223 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.74□□□□□ -0.53
OtofQ9ESF1 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
OtofQ9ESF1 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.73□□□□□ -0.53
OtofQ9ESF1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.73□□□□□ -0.53
OtofQ9ESF1 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.73□□□□□ -0.53
OtofQ9ESF1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
OtofQ9ESF1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.73□□□□□ -0.53
OtofQ9ESF1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.73□□□□□ -0.53
OtofQ9ESF1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
OtofQ9ESF1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
OtofQ9ESF1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms