Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtn3Q9ES97 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm13296-201ENSMUST00000117854 997 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm26461-201ENSMUST00000175064 290 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm2260-201ENSMUST00000184965 657 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtn3Q9ES97 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm12015-201ENSMUST00000117065 843 ntBASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm12036-201ENSMUST00000120008 530 ntBASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm45186-201ENSMUST00000206874 478 ntBASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Gm19208-201ENSMUST00000213861 912 ntBASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.68□□□□□ -0.38
Rtn3Q9ES97 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtn3Q9ES97 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtn3Q9ES97 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtn3Q9ES97 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtn3Q9ES97 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtn3Q9ES97 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rtn3Q9ES97 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rtn3Q9ES97 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms