Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm45186-201ENSMUST00000206874 478 ntBASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Gm12314-201ENSMUST00000118104 538 ntBASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Gm24990-201ENSMUST00000157406 323 ntBASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Gm24845-201ENSMUST00000158034 109 ntBASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Mir3102-201ENSMUST00000175555 104 ntBASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Gm25700-201ENSMUST00000177693 110 ntBASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Rps4l-202ENSMUST00000204242 789 ntBASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb3Q9ERD7 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gm11439-201ENSMUST00000118598 409 ntBASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gzmn-202ENSMUST00000225535 989 ntBASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb3Q9ERD7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms