Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Gm6855-201ENSMUST00000206307 790 ntBASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Gm45527-201ENSMUST00000211052 774 ntBASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gm43969-201ENSMUST00000204833 535 ntBASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-4Q9EQM3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm13445-201ENSMUST00000121664 307 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm25677-201ENSMUST00000174983 72 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm4034-201ENSMUST00000187674 480 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm7504-201ENSMUST00000201449 424 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm39288-201ENSMUST00000210554 446 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms