Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.62■□□□□ 0.09
U2af1Q9D883 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.62■□□□□ 0.09
U2af1Q9D883 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.62■□□□□ 0.09
U2af1Q9D883 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.62■□□□□ 0.09
U2af1Q9D883 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
U2af1Q9D883 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
U2af1Q9D883 Gm13611-201ENSMUST00000118269 318 ntBASIC15.62■□□□□ 0.09
U2af1Q9D883 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.62■□□□□ 0.09
U2af1Q9D883 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.62■□□□□ 0.09
U2af1Q9D883 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC15.62■□□□□ 0.09
U2af1Q9D883 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.62■□□□□ 0.09
U2af1Q9D883 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
U2af1Q9D883 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.62■□□□□ 0.09
U2af1Q9D883 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
U2af1Q9D883 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.62■□□□□ 0.09
U2af1Q9D883 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC15.62■□□□□ 0.09
U2af1Q9D883 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
U2af1Q9D883 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm7104-201ENSMUST00000179741 2532 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm13809-201ENSMUST00000117921 597 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm8815-201ENSMUST00000173809 620 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
U2af1Q9D883 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm34767-201ENSMUST00000191813 1062 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm5714-201ENSMUST00000197343 566 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm6450-201ENSMUST00000200896 574 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm6905-201ENSMUST00000205729 511 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.61■□□□□ 0.09
U2af1Q9D883 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
U2af1Q9D883 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.61■□□□□ 0.09
U2af1Q9D883 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms