Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm27501-201ENSMUST00000183599 107 ntBASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm18935-201ENSMUST00000212692 664 ntBASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm8712-201ENSMUST00000221090 701 ntBASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm7046-201ENSMUST00000221351 977 ntBASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm9996-201ENSMUST00000070359 913 ntBASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp4cQ9D7F7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Gm13297-201ENSMUST00000120205 934 ntBASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Gm30285-201ENSMUST00000214614 422 ntBASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4cQ9D7F7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4cQ9D7F7 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4cQ9D7F7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4cQ9D7F7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4cQ9D7F7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4cQ9D7F7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4cQ9D7F7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Chmp4cQ9D7F7 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC14.21□□□□□ -0.14
Chmp4cQ9D7F7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4cQ9D7F7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms