Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf225Q9D7D1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm13260-201ENSMUST00000117797 1264 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm14900-201ENSMUST00000120304 733 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm17655-201ENSMUST00000167969 255 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm43693-201ENSMUST00000196072 1249 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm43774-201ENSMUST00000196327 878 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 AC117656.3-205ENSMUST00000224606 1205 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm4822-201ENSMUST00000077551 479 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Zfp850-201ENSMUST00000099111 941 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf225Q9D7D1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Gm9083-201ENSMUST00000120423 819 ntBASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Mir7085-201ENSMUST00000184353 66 ntBASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Gm37424-201ENSMUST00000191727 561 ntBASIC13.1□□□□□ -0.31
Rnf225Q9D7D1 Gm43433-201ENSMUST00000196573 481 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms