Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc7Q9D541 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.87□□□□□ -0.19
Ccdc7Q9D541 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Cts7-204ENSMUST00000225321 1257 ntBASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Gm7399-201ENSMUST00000032395 858 ntBASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.87□□□□□ -0.19
Ccdc7Q9D541 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc7Q9D541 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.87□□□□□ -0.19
Ccdc7Q9D541 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm27516-201ENSMUST00000184237 98 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm45865-201ENSMUST00000211815 945 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Gm5705-201ENSMUST00000066241 711 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc7Q9D541 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.86□□□□□ -0.19
Ccdc7Q9D541 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc7Q9D541 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc7Q9D541 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc7Q9D541 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc7Q9D541 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc7Q9D541 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms