Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Gm5706-201ENSMUST00000181525 993 ntBASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Gm18038-201ENSMUST00000197900 485 ntBASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Gm18753-201ENSMUST00000201000 566 ntBASIC11.37□□□□□ -0.59
Otud1Q9CUB6 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Gm270-201ENSMUST00000223010 976 ntBASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Zmym2-202ENSMUST00000223669 1281 ntBASIC11.37□□□□□ -0.59
Otud1Q9CUB6 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Gm26448-201ENSMUST00000082446 203 ntBASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.37□□□□□ -0.59
Otud1Q9CUB6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm23699-201ENSMUST00000158835 135 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm18734-201ENSMUST00000172937 808 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Mir7677-201ENSMUST00000184226 67 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm28686-201ENSMUST00000187404 609 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm43138-201ENSMUST00000199123 708 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm9555-201ENSMUST00000200908 583 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm44683-201ENSMUST00000209088 484 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Otud1Q9CUB6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms