Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm7719-201ENSMUST00000182374 975 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm7504-201ENSMUST00000201449 424 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm43912-201ENSMUST00000204352 538 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm30671-201ENSMUST00000214898 318 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm10263-201ENSMUST00000085163 300 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm13019-201ENSMUST00000120000 276 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm14993-201ENSMUST00000121180 164 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm12453-201ENSMUST00000121981 331 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm17214-201ENSMUST00000164501 541 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm43752-201ENSMUST00000198475 697 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gm29763-201ENSMUST00000205306 616 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 BC106175-202ENSMUST00000219344 1213 ntBASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldnd1Q9CQX5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cldnd1Q9CQX5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm25053-201ENSMUST00000103982 133 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm25922-201ENSMUST00000104281 130 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm24679-201ENSMUST00000158762 111 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm17070-201ENSMUST00000170463 784 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm9507-202ENSMUST00000180157 654 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms